Detailed information of matrix profile MA1245.1

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Profile summary
Name: AT2G33710
Matrix ID: MA1245.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: P93007  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 79 108 176 59 63 65 3 7 25 0 0 31 8 149 293 ]
C [ 308 329 49 342 475 8 456 573 0 572 583 0 372 350 11 ]
G [ 76 35 178 47 13 350 112 3 551 11 0 551 11 17 156 ]
T [ 120 111 180 135 32 160 12 0 7 0 0 1 192 67 123 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1245.1 MA1245 1 AT2G33710 Arabidopsis thaliana
AP2/ERF domain
MA1245.2 MA1245 2 AT2G33710 Arabidopsis thaliana
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0253.1

ChIP-seq Centrality
log(P-value): -3654.78

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0253.1

ChIP-seq Centrality
log(P-value): -3552.37

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: