Detailed information of matrix profile MA1290.1

  1. Home
  2. Matrix > MA1290.1

Profile summary
Name: TCP17
Matrix ID: MA1290.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12000681
Uniprot ID: Q9LEZ9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 8 2 0 0 3 1 0 1 17 90 9 ]
C [ 6 5 2 0 0 107 108 106 80 6 77 ]
G [ 92 0 105 106 20 0 0 1 5 6 9 ]
T [ 2 101 1 2 85 0 0 0 6 6 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1290.1 MA1290 1 TCP17 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: