Detailed information of matrix profile MA1311.2

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Profile summary
Name: WRKY28
Matrix ID: MA1311.2
Class: WRKY
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q8VWJ2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 929 901 919 21 6 12 2059 2050 158 596 694 ]
C [ 287 240 67 11 8 2062 17 7 1730 254 436 ]
G [ 243 240 924 2047 1 8 6 18 55 740 330 ]
T [ 633 711 182 13 2077 10 10 17 149 502 632 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1311.1 MA1311 1 WRKY28 Arabidopsis thaliana
WRKY
MA1311.2 MA1311 2 WRKY28 Arabidopsis thaliana
WRKY
     

log(P-value) = -1555.95

TFFM details

TFFM ID: TFFM0420.2

ChIP-seq Centrality
log(P-value): -1168.58

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0420.2

ChIP-seq Centrality
log(P-value): -1164.21

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: