Detailed information of matrix profile MA1368.2

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Profile summary
Name: GT-4
Matrix ID: MA1368.2
Class: Helix-Turn-Helix
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9LU92  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 209 77 111 516 621 10 8 571 20 87 20 9 63 396 ]
C [ 130 157 55 20 6 612 181 24 26 1 5 5 36 41 ]
G [ 110 89 37 44 4 9 2 28 33 552 618 3 11 63 ]
T [ 197 323 443 66 15 15 455 23 567 6 3 629 536 146 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1368.1 MA1368 1 GT-4 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
MA1368.2 MA1368 2 GT-4 Arabidopsis thaliana
Trihelix Helix-Turn-Helix
     

log(P-value) = -266.57

TFFM details

TFFM ID: TFFM0669.1

ChIP-seq Centrality
log(P-value): -845.342

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0669.1

ChIP-seq Centrality
log(P-value): -844.826

TFFM detailed summary logos

Description:

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GC Content: