Detailed information of matrix profile MA1391.1

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Profile summary
Name: MYB33
Matrix ID: MA1391.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q8W1W6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 203 336 118 165 0 187 0 0 0 555 83 ]
C [ 68 5 1 0 480 79 0 0 0 0 138 ]
G [ 168 39 173 83 0 282 600 0 0 11 140 ]
T [ 161 220 308 352 120 52 0 600 600 34 239 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1391.1 MA1391 1 MYB33 Arabidopsis thaliana
Myb Helix-Turn-Helix
MA1391.2 MA1391 2 MYB33 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0361.1

ChIP-seq Centrality
log(P-value): -7249.87

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0361.1

ChIP-seq Centrality
log(P-value): -6908.99

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: