Detailed information of matrix profile MA1398.2

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Profile summary
Name: KUA1
Matrix ID: MA1398.2
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9LVS0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 873 328 69 127 107 1751 14 15 35 943 633 ]
C [ 194 600 1567 61 40 29 14 1771 1502 102 377 ]
G [ 273 211 112 18 41 11 9 17 27 335 174 ]
T [ 477 678 69 1611 1629 26 1780 14 253 437 633 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1398.1 MA1398 1 KUA1 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
MA1398.2 MA1398 2 KUA1 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     

log(P-value) = -1346.66

TFFM details

TFFM ID: TFFM0278.2

ChIP-seq Centrality
log(P-value): -1500.82

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0278.2

ChIP-seq Centrality
log(P-value): -1604.77

TFFM detailed summary logos

Description:

Alias:

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Consensus:

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GC Content: