Detailed information of matrix profile MA1409.1

  1. Home
  2. Matrix > MA1409.1

Profile summary
Name: OsRR22
Matrix ID: MA1409.1
Class: Other
Family: ARR
Collection: CORE
Taxon: Plants
Species: Oryza sativa
Data Type: PBM
Validation: 12610214
Uniprot ID: Q5SML5  
Source: 27931185
Comment:

Sequence logo

Frequency matrix

         
A [ 62666 6173 2838 7297 19416 98511 1028 1322 4047 25591 ]
C [ 5511 46756 92633 611 464 510 778 97670 6041 11771 ]
G [ 11356 33145 2838 91648 7724 484 287 522 3042 11381 ]
T [ 20468 13926 1690 444 72395 495 97906 486 86870 51257 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1409.1 MA1409 1 OsRR22 Oryza sativa
ARR Other
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: