Detailed information of matrix profile MA1424.1

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Profile summary
Name: ERF019
Matrix ID: MA1424.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 31133749
Uniprot ID: O80542  
Source: 27203113
Comment: PBM

Sequence logo

Frequency matrix

         
A [ 192 275 63 30 902 0 0 0 796 0 741 320 293 285 275 ]
C [ 468 97 528 949 0 1000 1000 0 127 1000 90 359 288 172 330 ]
G [ 120 328 144 3 97 0 0 1000 5 0 132 90 152 293 191 ]
T [ 218 298 263 16 0 0 0 0 70 0 35 229 265 248 203 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1424.1 MA1424 1 ERF019 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: