Detailed information of matrix profile MA1430.1

  1. Home
  2. Matrix > MA1430.1

Profile summary
Name: TB1
Matrix ID: MA1430.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Oryza sativa
Data Type: PBM
Validation: 12000681
Uniprot ID: Q8LN68  
Source: 31133749
Comment:

Sequence logo

Frequency matrix

         
A [ 0 0 84 0 0 41 37 153 143 385 ]
C [ 0 0 308 998 999 958 953 839 648 405 ]
G [ 999 999 518 0 0 0 0 4 13 119 ]
T [ 0 0 88 0 0 0 7 3 195 89 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1430.1 MA1430 1 TB1 Oryza sativa
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: