Detailed information of matrix profile MA1431.1

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Profile summary
Name: rst2
Matrix ID: MA1431.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: CORE
Taxon: Fungi
Species: Schizosaccharomyces pombe
Data Type: PBM
Validation: 10982411
Uniprot ID: P78871  
Source: 31133749
Comment: binding site: CTTCCCCTCATACACA

Sequence logo

Frequency matrix

         
A [ 256 391 22 7 0 6 208 56 382 165 ]
C [ 163 188 937 880 996 990 40 896 216 379 ]
G [ 193 204 13 4 2 0 529 2 131 141 ]
T [ 386 214 26 108 1 2 221 44 269 313 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1431.1 MA1431 1 rst2 Schizosaccharomyces pombe
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: