Detailed information of matrix profile MA1499.1

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Profile summary
Name: HOXB4
Matrix ID: MA1499.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P17483  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 4683 0 3621 9080 0 0 9080 4397 ]
C [ 1377 2103 5459 0 0 0 0 1409 ]
G [ 4397 0 0 265 0 271 55 4683 ]
T [ 1021 9080 0 0 9080 9080 0 1388 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1499.1 MA1499 1 HOXB4 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0505.1

ChIP-seq Centrality
log(P-value): -1138.99

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0505.1

ChIP-seq Centrality
log(P-value): -1322.29

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: