Detailed information of matrix profile MA1519.1

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Profile summary
Name: LHX5
Matrix ID: MA1519.1
Class: Homeo domain factors
Family: HD-LIM factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: Q9H2C1  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 394 0 7142 7142 0 0 7142 2749 ]
C [ 3420 2093 187 0 0 144 0 1576 ]
G [ 3721 0 0 0 0 28 160 1483 ]
T [ 1215 5049 0 0 7142 7142 0 1333 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1519.1 MA1519 1 LHX5 Homo sapiens
HD-LIM factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: