Detailed information of matrix profile MA1524.1

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Profile summary
Name: MSGN1
Matrix ID: MA1524.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 21750544
Uniprot ID: A6NI15  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1190 3096 663 0 6373 2424 3766 10 0 412 514 1388 ]
C [ 2080 576 6373 6373 0 627 190 287 10 1132 3269 1976 ]
G [ 1615 3277 1613 17 374 112 814 17 6373 3104 1503 1781 ]
T [ 1488 408 726 0 0 3950 2607 6373 0 3269 3104 1228 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1524.1 MA1524 1 MSGN1 Homo sapiens
Tal-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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