Detailed information of matrix profile MA1527.1

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Profile summary
Name: NFIC(var.2)
Matrix ID: MA1527.1
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 22456058
Uniprot ID: P08651  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 398 167 0 0 0 100 696 389 443 476 203 0 0 3 2118 1086 364 ]
C [ 560 616 0 0 3 2118 268 705 580 382 340 0 2118 2118 0 19 695 ]
G [ 761 65 5 2118 2118 0 694 492 678 881 97 2118 13 0 0 1032 647 ]
T [ 399 2118 2118 0 0 0 461 531 417 379 2118 0 0 0 0 154 412 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1527.1 MA1527 1 NFIC(var.2) Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: