Detailed information of matrix profile MA1538.1

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Profile summary
Name: NR2F1(var.3)
Matrix ID: MA1538.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 14559106
Uniprot ID: P10589  
Source: 28473536
Comment: additional binding mode

Sequence logo

Frequency matrix

         
A [ 1651 2466 44 75 22 20 2473 813 0 81 3515 0 131 57 308 ]
C [ 280 75 121 45 87 3515 58 855 89 15 95 3515 3515 949 1177 ]
G [ 1271 1049 3515 3515 232 58 1041 858 52 3515 0 1 75 32 205 ]
T [ 312 79 356 67 3515 171 4 990 3515 12 0 45 50 2566 1825 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1538.1 MA1538 1 NR2F1(var.3) Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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