Detailed information of matrix profile MA1544.1

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Profile summary
Name: OVOL1
Matrix ID: MA1544.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26504231
Uniprot ID: O14753  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 6192 9556 8031 15006 0 0 1 0 0 15006 951 3355 1613 2923 ]
C [ 2530 505 793 389 15006 15006 0 0 0 9 5767 3695 6591 3936 ]
G [ 3015 5450 3334 0 0 0 15006 4 0 0 2465 3415 522 4872 ]
T [ 3269 4724 6974 2100 0 0 4 15006 15006 0 15006 4541 8415 3275 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1544.1 MA1544 1 OVOL1 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: