Detailed information of matrix profile MA1555.1

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Profile summary
Name: RXRB(var.2)
Matrix ID: MA1555.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 14559106
Uniprot ID: P28702  
Source: 28473536
Comment: additional binding mode

Sequence logo

Frequency matrix

         
A [ 614 934 59 27 35 23 1207 11 92 1803 309 58 18 124 ]
C [ 190 59 29 39 85 1803 15 59 35 53 1803 1803 866 868 ]
G [ 851 870 1803 1803 157 41 596 0 1803 41 11 32 14 194 ]
T [ 148 15 103 270 1803 123 7 1803 8 14 23 58 937 617 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1555.1 MA1555 1 RXRB(var.2) Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: