Detailed information of matrix profile MA1558.1

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Profile summary
Name: SNAI1
Matrix ID: MA1558.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26170144
Uniprot ID: O95863  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 5274 6993 446 19982 1766 72 38 706 1639 10088 ]
C [ 3187 501 19982 297 517 5 0 0 10938 4592 ]
G [ 6410 12989 275 91 19982 19982 42 19982 5306 9894 ]
T [ 5112 3518 340 568 306 28 19982 311 9044 6356 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1558.1 MA1558 1 SNAI1 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: