Detailed information of matrix profile MA1560.1

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Profile summary
Name: SOHLH2
Matrix ID: MA1560.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26869299
Uniprot ID: Q9NX45  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 230 172 45 1212 0 14 36 41 272 381 ]
C [ 485 264 1212 0 1212 0 65 4 1212 239 ]
G [ 184 1212 29 41 11 1212 0 1212 172 369 ]
T [ 313 276 70 0 7 15 1212 4 153 224 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1560.1 MA1560 1 SOHLH2 Homo sapiens
PAS domain factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: