Detailed information of matrix profile MA1563.1

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Profile summary
Name: SOX18
Matrix ID: MA1563.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 7651823
Uniprot ID: P35713  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 153 589 0 589 589 0 188 116 ]
C [ 216 33 589 139 104 374 0 287 ]
G [ 168 140 0 216 67 0 589 190 ]
T [ 52 94 0 27 14 589 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1563.1 MA1563 1 SOX18 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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