Detailed information of matrix profile MA1574.1

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Profile summary
Name: THRB
Matrix ID: MA1574.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 19741045
Uniprot ID: P10828  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 2306 4047 167 104 20 35 8626 8626 8626 24 36 23 136 8626 1936 ]
C [ 1397 234 52 14 132 8626 16 165 43 6 14 246 8626 148 2190 ]
G [ 3705 4579 8626 8626 726 824 817 2025 1900 8626 8626 1400 726 3668 2160 ]
T [ 1219 74 392 1892 8626 1851 13 1587 11 61 2010 8626 2555 225 2340 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1574.1 MA1574 1 THRB Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0609.1

ChIP-seq Centrality
log(P-value): -3137.61

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0609.1

ChIP-seq Centrality
log(P-value): -2364.64

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: