Detailed information of matrix profile MA1576.1

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Profile summary
Name: THRB(var.3)
Matrix ID: MA1576.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 19741045
Uniprot ID: P10828  
Source: 28473536
Comment: additional binding mode

Sequence logo

Frequency matrix

         
A [ 119 0 28 389 0 0 13 11 263 42 102 0 0 389 0 7 0 0 323 ]
C [ 31 8 89 19 389 389 75 134 28 221 86 0 0 11 389 389 9 175 8 ]
G [ 157 0 389 17 4 59 38 93 89 71 205 6 389 0 0 3 0 73 74 ]
T [ 82 381 45 71 17 20 389 151 9 54 0 393 3 86 2 4 389 214 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1576.1 MA1576 1 THRB(var.3) Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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