Detailed information of matrix profile MA1578.1

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Profile summary
Name: VEZF1
Matrix ID: MA1578.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: PBM
Validation: 20062523
Uniprot ID: Q14119  
Source: 31133749
Comment: VEZF1 specifically interacts with dG-dC strings within HS4 footprints I and III and the êA-globin promoter.

Sequence logo

Frequency matrix

         
A [ 71 1 4 2 6 10 406 44 240 333 ]
C [ 790 997 995 997 989 977 357 550 171 173 ]
G [ 137 0 0 0 0 3 110 70 211 152 ]
T [ 0 0 0 0 4 8 125 334 377 339 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1578.1 MA1578 1 VEZF1 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0616.1

ChIP-seq Centrality
log(P-value): -1308.63

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0616.1

ChIP-seq Centrality
log(P-value): -1011.77

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: