Detailed information of matrix profile MA1585.1

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Profile summary
Name: ZKSCAN1
Matrix ID: MA1585.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 28092692
Uniprot ID: P17029  
Source: 30462313
Comment: Matches motif derived from SmiLE-seq

Sequence logo

Frequency matrix

         
A [ 4633 187 6054 18 0 6079 12 13 605 1273 ]
C [ 456 2268 53 5 0 48 101 12 1303 1480 ]
G [ 584 364 20 6092 0 0 5980 6075 750 2880 ]
T [ 454 3308 0 12 6127 0 34 27 3469 494 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1585.1 MA1585 1 ZKSCAN1 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     

log(P-value) = -1461.86

TFFM details

TFFM ID: TFFM0630.1

ChIP-seq Centrality
log(P-value): -1433.46

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0630.1

ChIP-seq Centrality
log(P-value): -3642.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: