Detailed information of matrix profile MA1600.1

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Profile summary
Name: ZNF684
Matrix ID: MA1600.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25690854
Uniprot ID: Q5T5D7  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 524 82 1238 9 1184 60 9 13 40 1012 3 44 7 0 249 56 216 606 ]
C [ 168 403 24 1253 11 216 14 1236 1221 9 1226 1253 1229 1263 129 59 168 201 ]
G [ 362 314 68 9 110 1135 59 25 2 57 63 10 7 0 18 14 514 326 ]
T [ 206 721 19 19 131 74 1259 10 67 220 61 6 92 3 1107 1224 619 127 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1600.1 MA1600 1 ZNF684 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0646.1

ChIP-seq Centrality
log(P-value): -263.522

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0646.1

ChIP-seq Centrality
log(P-value): -265.869

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: