Detailed information of matrix profile MA1602.1

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Profile summary
Name: ZSCAN29
Matrix ID: MA1602.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 28473536
Uniprot ID: Q8IWY8  
Source: 27852650
Comment: HT-SELEX

Sequence logo

Frequency matrix

         
A [ 68 20 0 4 0 989 4 647 0 306 127 199 ]
C [ 497 0 16 993 48 4 838 0 961 207 40 294 ]
G [ 124 977 4 0 0 0 0 350 24 310 786 326 ]
T [ 310 0 977 0 949 4 155 0 12 175 44 179 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1602.1 MA1602 1 ZSCAN29 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0648.1

ChIP-seq Centrality
log(P-value): -269.502

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0648.1

ChIP-seq Centrality
log(P-value): -259.498

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: