Detailed information of matrix profile MA1618.1

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Profile summary
Name: Ptf1a
Matrix ID: MA1618.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 23754747
Uniprot ID: Q9QX98  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 4092 4476 8554 133 14064 250 12132 126 241 965 1511 3491 3754 ]
C [ 2989 3662 2747 14006 118 466 1724 224 122 2058 2341 3601 3689 ]
G [ 3661 3568 2414 130 153 13072 437 118 13868 2854 2295 3664 3376 ]
T [ 3699 2735 726 172 106 653 148 13973 210 8564 8294 3685 3622 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1618.1 MA1618 1 Ptf1a Mus musculus
Tal-related factors Basic helix-loop-helix factors (bHLH)
     

log(P-value) = -6906.02

TFFM details

TFFM ID: TFFM0567.1

ChIP-seq Centrality
log(P-value): -19229.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0567.1

ChIP-seq Centrality
log(P-value): -19289.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: