Detailed information of matrix profile MA1619.1

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Profile summary
Name: Ptf1a(var.2)
Matrix ID: MA1619.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 23754747
Uniprot ID: Q9QX98  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 1869 1978 4346 49 7119 34 224 26 27 535 1221 1602 ]
C [ 1803 2430 1070 7149 41 307 6697 66 27 1312 1632 1977 ]
G [ 1974 1629 1308 28 65 6689 299 40 7150 1065 2426 1803 ]
T [ 1607 1216 529 27 28 223 33 7121 49 4341 1974 1871 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1619.1 MA1619 1 Ptf1a(var.2) Mus musculus
Tal-related factors Basic helix-loop-helix factors (bHLH)
     

log(P-value) = -2614.58

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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