Detailed information of matrix profile MA1620.1

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Profile summary
Name: Ptf1a(var.3)
Matrix ID: MA1620.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 23754747
Uniprot ID: Q9QX98  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 2834 2613 6867 184 10033 116 256 85 68 527 1678 2293 ]
C [ 2469 3700 1188 9887 60 8567 9612 94 109 1615 2527 3004 ]
G [ 2664 2379 1410 113 84 1182 294 98 9972 1516 3341 2183 ]
T [ 2324 1599 826 107 114 426 129 10014 142 6633 2745 2811 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1620.1 MA1620 1 Ptf1a(var.3) Mus musculus
Tal-related factors Basic helix-loop-helix factors (bHLH)
     

log(P-value) = -3539.04

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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