Detailed information of matrix profile MA1664.1

  1. Home
  2. Matrix > MA1664.1

Profile summary
Name: HSFA6B
Matrix ID: MA1664.1
Class: Heat shock factors
Family: HSF factors
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 27493213
Uniprot ID: Q9LUH8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 328 1 580 509 73 159 70 22 4 15 411 0 562 420 139 ]
C [ 61 1 2 6 154 191 34 8 572 101 45 5 13 34 121 ]
G [ 168 595 8 16 291 131 13 16 24 46 136 595 6 59 242 ]
T [ 43 3 10 69 82 119 483 554 0 438 8 0 19 87 98 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1664.1 MA1664 1 HSFA6B Arabidopsis thaliana
HSF factors Heat shock factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0671.1

ChIP-seq Centrality
log(P-value): -2540.12

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0671.1

ChIP-seq Centrality
log(P-value): -2523.12

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: