Detailed information of matrix profile MA1665.1

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Profile summary
Name: HSFB2A
Matrix ID: MA1665.1
Class: Heat shock factors
Family: HSF factors
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24477691
Uniprot ID: Q9SCW4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 12 578 573 81 99 46 10 0 5 461 111 507 ]
C [ 3 0 0 78 274 4 0 598 157 6 17 11 ]
G [ 574 10 6 352 132 3 3 0 35 97 429 39 ]
T [ 11 12 21 89 95 547 587 2 403 36 43 43 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1665.1 MA1665 1 HSFB2A Arabidopsis thaliana
HSF factors Heat shock factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0672.1

ChIP-seq Centrality
log(P-value): -978.272

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0672.1

ChIP-seq Centrality
log(P-value): -1004.12

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: