Detailed information of matrix profile MA1671.1

  1. Home
  2. Matrix > MA1671.1

Profile summary
Name: ERF118
Matrix ID: MA1671.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25220462
Uniprot ID: Q9CA27  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 703 977 254 30 195 0 19 170 2 593 931 ]
C [ 1819 385 2309 3343 8 3396 3370 9 3338 1903 292 ]
G [ 234 1143 354 0 3186 2 3 3190 11 286 1537 ]
T [ 643 894 482 26 10 1 7 30 48 617 639 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1671.1 MA1671 1 ERF118 Arabidopsis thaliana
AP2/ERF domain
     

log(P-value) = -1336.38

TFFM details

TFFM ID: TFFM0666.1

ChIP-seq Centrality
log(P-value): -516.326

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0666.1

ChIP-seq Centrality
log(P-value): -544.211

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: