Detailed information of matrix profile MA1680.1

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Profile summary
Name: RVE7
Matrix ID: MA1680.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: B3H5A8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 658 857 1074 1822 1850 1856 26 1874 4 10 113 496 843 690 ]
C [ 423 277 92 11 12 5 5 4 3 1863 109 252 327 334 ]
G [ 318 397 118 15 11 10 11 2 2 3 18 189 317 272 ]
T [ 488 356 603 39 14 16 1845 7 1878 11 1647 950 400 591 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1680.1 MA1680 1 RVE7 Arabidopsis thaliana
Myb Helix-Turn-Helix
     

log(P-value) = -2538.55

TFFM details

TFFM ID: TFFM0690.1

ChIP-seq Centrality
log(P-value): -2277.46

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0690.1

ChIP-seq Centrality
log(P-value): -2292.95

TFFM detailed summary logos

Description:

Alias:

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Included Models:

GC Content: