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Detailed information of matrix profile
MA1686.1
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Matrix > MA1686.1
Profile summary
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Name:
ARF13
Matrix ID:
MA1686.1
Class:
B3 domain
Family:
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
DAP-seq
Validation:
24485461
Uniprot ID:
D9HNU0
Source:
30375394
Comment:
The motif matches the TGTC core motif associated to ARF TFs.
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
6270
646
3160
27
31
8
27
49
25
48
265
649
408
1172
]
C [
875
6710
214
393
55
943
8175
8022
8271
8001
7420
463
4009
652
]
G [
516
518
4283
33
8284
111
86
67
55
29
145
6725
543
794
]
T [
745
532
749
7953
36
7344
118
268
55
328
576
569
3446
5788
]
Binding sites information
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
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More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1686.1
MA1686
1
ARF13
Zea mays
B3 domain
JASPAR
TRANSFAC
MEME
RAW PFM
log(P-value) = -23375.3
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Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: