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Detailed information of matrix profile
MA1695.1
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Matrix > MA1695.1
Profile summary
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Name:
ARF36
Matrix ID:
MA1695.1
Class:
B3 domain
Family:
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
DAP-seq
Validation:
24485461
Uniprot ID:
Source:
30375394
Comment:
The motif matches the TGTC core motif associated to ARF TFs.
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
2495
6267
1406
2790
42
53
28
94
75
70
238
483
1997
1079
]
C [
759
2452
7323
595
316
83
652
10495
9538
10568
10453
8866
1646
4470
]
G [
6723
1444
1586
4456
53
11032
87
120
130
86
121
795
6035
1368
]
T [
1273
1087
935
3409
10839
82
10483
541
1507
526
438
1106
1572
4333
]
Binding sites information
HTML file
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External links
Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1695.1
MA1695
1
ARF36
Zea mays
B3 domain
JASPAR
TRANSFAC
MEME
RAW PFM
log(P-value) = -18594.9
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Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: