Detailed information of matrix profile PB0169.1

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Profile summary
Name: Sox15_2
Matrix ID: PB0169.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P43267  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 11 16 29 62 53 8 5 41 52 71 10 13 17 22 53 ]
C [ 25 18 20 9 26 10 10 12 31 5 6 15 42 32 17 ]
G [ 29 19 33 17 6 8 69 16 7 14 16 8 15 38 26 ]
T [ 35 46 18 13 16 74 16 31 10 10 69 65 25 8 4 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0169.1 PB0169 1 Sox15_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Included Models:

GC Content: