Detailed information of matrix profile PH0016.1

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Profile summary
Name: Cux1_1
Matrix ID: PH0016.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P70403  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 19 28 41 10 23 14 32 97 1 2 83 62 11 9 21 14 7 ]
C [ 30 31 15 30 11 1 2 1 2 67 1 9 42 52 12 22 27 ]
G [ 10 29 8 48 35 6 61 1 1 1 7 16 19 15 51 54 6 ]
T [ 41 13 35 13 31 80 6 2 96 29 8 13 29 23 16 11 59 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0016.1 PH0016 1 Cux1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: