Detailed information of matrix profile PH0099.1

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Profile summary
Name: Lhx9
Matrix ID: PH0099.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9WUH2  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 14 5 20 66 10 2 96 97 1 0 83 59 18 21 51 16 9 ]
C [ 55 38 48 7 27 15 3 0 2 2 0 4 10 36 26 44 37 ]
G [ 14 35 6 14 4 0 2 2 0 3 15 27 11 16 15 21 18 ]
T [ 17 22 25 12 59 83 0 1 97 96 2 10 61 27 8 19 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0099.1 PH0099 1 Lhx9 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: