Detailed information of matrix profile UN0058.1

  1. Home
  2. Matrix > UN0058.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: PK21687.1
Matrix ID: UN0058.1
Class: Tryptophan cluster factors
Family: Myb/SANT domain factors
Collection: UNVALIDATED
Taxon: Plants
Species: Cannabis sativa
Data Type: PBM
Validation:
Uniprot ID:
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 405 248 10 102 6 54 13 588 369 ]
C [ 100 27 4 7 69 18 66 33 90 ]
G [ 348 667 972 881 55 10 12 44 226 ]
T [ 144 56 11 8 868 916 906 332 314 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0058.1 UN0058 1 PK21687.1 Cannabis sativa
Myb/SANT domain factors Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: