Detailed information of matrix profile UN0137.1

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Profile summary

Name: SOX7
Matrix ID: UN0137.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9BT81  
Source: 28473536
Comment: not supported by literature (dimer); I propose to promote http://jaspar2018.genereg.net/matrix/PB0073.1

Sequence logo

Frequency matrix

         
A [ 16897 0 16897 16897 61 4261 4470 3512 16897 181 524 132 1957 ]
C [ 1126 16897 514 1625 0 1365 3900 7583 9 482 4 23 1308 ]
G [ 1328 0 11 414 22 7668 4099 1350 14 1654 506 16897 1340 ]
T [ 2032 141 538 178 16897 3603 4428 4452 82 16897 16897 21 16897 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0137.1 UN0137 1 SOX7 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: