Detailed information of matrix profile UN0244.1

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Profile summary

Name: ZSCAN16
Matrix ID: UN0244.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9H4T2  
Source: 28473536
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 26957 43086 7390 33 4 3 2 47911 50207 7 49888 18 50284 9 4 1168 3 1 13238 ]
C [ 9213 370 4647 1139 0 4 17 0 6 50286 29 2 3 2 50281 50287 1173 50228 4109 ]
G [ 10456 4733 30730 26 50282 0 0 2806 2 0 7 50276 8 50287 4 0 3 77 8013 ]
T [ 3664 2389 7524 49240 7 50287 50276 22 141 4 493 1 1 1 5 3 50279 4 24930 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0244.1 UN0244 1 ZSCAN16 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: