Detailed information of matrix profile UN0260.1

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Profile summary

Name: Prdm9
Matrix ID: UN0260.1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation:
Uniprot ID: Q9NQV7  
Source: 30462313
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 3015 3656 223 2049 920 153 961 115 7066 170 178 2233 457 1033 3498 1853 ]
C [ 2855 719 123 1798 202 56 7262 498 133 9283 799 204 6962 6857 1782 2741 ]
G [ 2213 1608 9295 5520 278 9649 536 70 2443 115 44 6722 310 241 1607 1222 ]
T [ 1854 3954 296 570 8537 79 1178 9254 295 369 8916 778 2208 1806 3050 4121 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0260.1 UN0260 1 Prdm9 Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
     

log(P-value) = -7712.22

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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