Detailed information of matrix profile UN0310.1

  1. Home
  2. Matrix > UN0310.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HMGXB4
Matrix ID: UN0310.1
Class: High-mobility group (HMG) domain factors
Family: PBRM1-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation:
Uniprot ID: Q9UGU5  
Source: ReMap
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 4646 1956 1590 12273 187 882 426 288 296 485 2173 1736 2071 ]
C [ 2895 5356 4405 1056 333 579 1032 661 287 13197 861 5684 4432 ]
G [ 4299 5437 3726 395 13331 12331 11663 12907 13208 71 10306 4858 3994 ]
T [ 2179 1270 4298 295 168 227 898 163 228 266 679 1741 3522 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0310.1 UN0310 1 HMGXB4 Homo sapiens
PBRM1-related factors High-mobility group (HMG) domain factors
     

log(P-value) = -535.534

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: