Detailed information of matrix profile UN0347.1

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Profile summary

Name: ANAC075
Matrix ID: UN0347.1
Class: NAC/NAM
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9M0F8  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 249 297 404 113 455 591 163 17 1 0 71 177 238 163 237 510 13 788 677 8 110 142 412 147 ]
C [ 151 148 80 41 30 12 40 766 3 0 164 74 145 230 176 23 516 1 112 1 459 83 52 339 ]
G [ 168 162 174 585 30 73 476 2 113 1 543 26 185 241 139 83 188 3 0 770 65 19 68 85 ]
T [ 225 186 135 54 278 117 114 8 676 792 15 516 225 159 241 177 76 1 4 14 159 549 261 222 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0347.1 UN0347 1 ANAC075 Arabidopsis thaliana
NAC/NAM
     

log(P-value) = -488.804

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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