Detailed information of matrix profile UN0356.1

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Profile summary

Name: AT5G05550
Matrix ID: UN0356.1
Class: MADS box factors
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9FFG0  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 845 482 41 160 24 7 13 105 59 128 1363 597 707 ]
C [ 280 390 1863 13 2244 2283 0 119 2038 68 208 641 289 ]
G [ 463 327 43 328 15 0 2281 2017 10 2037 428 377 796 ]
T [ 710 1099 351 1797 15 8 4 57 191 65 299 683 506 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0356.1 UN0356 1 AT5G05550 Arabidopsis thaliana
MADS box factors
     

log(P-value) = -1192.49

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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