Detailed information of matrix profile UN0360.1

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Profile summary

Name: CDF5
Matrix ID: UN0360.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SEZ3  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 1306 826 3821 3802 3820 3820 3821 0 941 1597 ]
C [ 482 900 0 0 0 0 0 0 510 325 ]
G [ 645 926 0 0 0 0 0 3821 724 985 ]
T [ 1388 1169 0 19 1 1 0 0 1646 914 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0360.1 UN0360 1 CDF5 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
     

log(P-value) = -1334.05

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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