Detailed information of matrix profile UN0364.1

  1. Home
  2. Matrix > UN0364.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ERF011
Matrix ID: UN0364.1
Class: AP2/ERF domain
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SNE1  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 732 811 412 139 2305 13 8 23 2115 10 841 1197 733 749 ]
C [ 765 393 807 2130 7 2411 2427 12 74 2394 1106 437 629 508 ]
G [ 349 524 326 96 98 10 5 2401 47 14 275 268 367 526 ]
T [ 600 718 901 81 36 12 6 10 210 28 224 544 717 663 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0364.1 UN0364 1 ERF011 Arabidopsis thaliana
AP2/ERF domain
     

log(P-value) = -3846.21

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: