Detailed information of matrix profile UN0376.1

  1. Home
  2. Matrix > UN0376.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: NAC053
Matrix ID: UN0376.1
Class: NAC/NAM
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q949N0  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 1157 1383 2 3873 3762 1 3241 3640 3814 819 1125 1168 ]
C [ 1073 799 3931 8 161 2 134 56 31 1483 1249 634 ]
G [ 639 960 2 38 8 3927 50 17 21 640 687 812 ]
T [ 1093 820 27 43 31 32 537 249 96 1020 901 1348 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0376.1 UN0376 1 NAC053 Arabidopsis thaliana
NAC/NAM
     

log(P-value) = -3273.37

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: