Detailed information of matrix profile MA0087.1

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Profile summary
Name: Sox5
Matrix ID: MA0087.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: SELEX
Validation: 1396566
Uniprot ID: P35710  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 23 0 0 1 0 1 8 ]
C [ 0 0 0 0 1 1 3 ]
G [ 0 1 0 22 0 0 4 ]
T [ 0 22 23 0 22 21 8 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0087.1 MA0087 1 Sox5 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: SRY (sex determining region Y)-box 5

Alias: L-SOX5,MGC35153

Symbol: SOX5

Consensus:

Included Models:

GC Content: