Detailed information of matrix profile MA0098.3

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Profile summary
Name: ETS1
Matrix ID: MA0098.3
Class: Tryptophan cluster factors
Family: Ets-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 20517297
Uniprot ID: P14921  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2683 180 425 0 0 2683 2683 1102 89 803 ]
C [ 210 2683 2683 21 0 0 9 21 712 401 ]
G [ 640 297 7 2683 2683 0 31 1580 124 1083 ]
T [ 241 22 0 0 12 0 909 12 1970 396 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0098.1 MA0098 1 ETS1 Homo sapiens
Ets-related factors Tryptophan cluster factors
MA0098.2 MA0098 2 Ets1 Mus musculus
Ets-related factors Tryptophan cluster factors
MA0098.3 MA0098 3 ETS1 Homo sapiens
Ets-related factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0030.1

ChIP-seq Centrality
log(P-value): -1248.64

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0030.1

ChIP-seq Centrality
log(P-value): -1320.63

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: